Package: AgePopDenom 1.2.3

Mohamed A. Yusuf

AgePopDenom: Model Fine-Scale Age-Structured Population Data using Open-Source Data

Automate the modelling of age-structured population data using survey data, grid population estimates and urban-rural extents.

Authors:Mohamed A. Yusuf [aut, cre], Victor A. Alegana [aut], Chibuzor Christopher Nnanatu [aut], Andrew Tatem [aut]

AgePopDenom_1.2.3.tar.gz
AgePopDenom_1.2.3.zip(r-4.7)AgePopDenom_1.2.3.zip(r-4.6)AgePopDenom_1.2.3.zip(r-4.5)
AgePopDenom_1.2.3.tgz(r-4.6-any)AgePopDenom_1.2.3.tgz(r-4.5-any)
AgePopDenom_1.2.3.tar.gz(r-4.7-any)AgePopDenom_1.2.3.tar.gz(r-4.6-any)
AgePopDenom_1.2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
AgePopDenom/json (API)

# Install 'AgePopDenom' in R:
install.packages('AgePopDenom', repos = c('https://truenomad.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/truenomad/agepopdenom/issues

Pkgdown/docs site:https://truenomad.github.io

On CRAN:

Conda:

4.78 score 3 stars 6 scripts 253 downloads 27 exports 89 dependencies

Last updated from:37542e1a0e. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK170
source / vignettesOK242
linux-release-x86_64OK162
macos-release-arm64OK121
macos-oldrel-arm64OK134
windows-develOK117
windows-releaseOK142
windows-oldrelOK102
wasm-releaseOK141

Exports:aggregate_and_extract_gammacompute_covcreate_prediction_datacreate_project_structuredownload_dhs_datasetsdownload_pop_rastersdownload_shapefileextract_afurextentextract_age_paramextract_betasfit_spatial_modelgenerate_age_pop_rastergenerate_age_pop_tablegenerate_age_pyramid_plotgenerate_gamma_predictionsgenerate_gamma_raster_plotgenerate_variogram_plotget_current_script_pathinitinstall_suggested_packageslog_likprocess_dhs_dataprocess_final_population_dataprocess_gamma_predictionsrasterize_datarun_full_workflowsimulate_dummy_dhs_pr

Dependencies:abindaskpassbitbit64brioclassclassIntclicliprcountrycodecpp11crayoncurlDBIdigestdplyre1071farverFNNforcatsforeigngenericsgetPassggplot2gluegstatgtablehavenherehmshttrintervalsiotoolsisobandjsonliteKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixmimeopensslpillarpkgconfigprettyunitsprogressproxypurrrqdapRegexR6rappdirsRColorBrewerRcppRcppEigenrdhsreadrrlangrprojrootrstudioapis2S7scalessfsftimespspacetimestarsstorrstringistringrsysterratibbletidyrtidyselectTMBtzdbunitsutf8vctrsviridisLitevroomwithrwkxml2xtszoo

Using AgePopDenom

Rendered fromusing_agepopdenom.Rmdusingknitr::rmarkdownon May 24 2026.

Last update: 2025-07-21
Started: 2025-01-17

Readme and manuals

Help Manual

Help pageTopics
Aggregate Individual Survey Data and Extract Gamma Parameters by Locationaggregate_and_extract_gamma
Automatically Fit a Variogram ModelautofitVariogram
Compute Covariance Matrix for Spatial Modelcompute_cov
Generate or Load Cached Predictors Datacreate_prediction_data
Create a Standardized Project Folder Structurecreate_project_structure
Download WHO ADM2 Boundaries with Partial Updateads the latest PR (household) and GE (geographic) DHS datasets for specified countries.download_dhs_datasets
Download population rasters for given country codes.download_pop_rasters
Download WHO ADM2 Boundaries with Partial Updatedownload_shapefile
Extract Urban/Rural Extent Rasterextract_afurextent
Extract Parameters and Optimization Details with Log-Likelihoodextract_age_param
Extract Beta Parameters from Model Outputextract_betas
Fit a Spatial Model for Age Parameters using TMBfit_spatial_model
Generate Age Population Rastergenerate_age_pop_raster
Generate Age Population Tablesgenerate_age_pop_table
Generate and Save Age Pyramid Plotgenerate_age_pyramid_plot
Predict Gamma Distribution Parameters for Spatial Gridgenerate_gamma_predictions
Generate and Save Raster Plot for Gamma Predictionsgenerate_gamma_raster_plot
Generate Variogram Plotgenerate_variogram_plot
Get the path to the currently running scriptget_current_script_path
Initialize Full Pipeline Script and Model Scriptinit
Log-Likelihood Function for Spatial Modellog_lik
Process DHS Data: Merge RDS Files with Shapefiles and Extract Gamma Parametersprocess_dhs_data
Process Final Population Dataprocess_final_population_data
Process Gamma Prediction Resultsprocess_gamma_predictions
Rasterize Spatial Datarasterize_data
Run Country-Specific Spatial Modeling Workflow with Loggingrun_full_workflow
Simulate Processed DHS Survey Personal Records Datasimulate_dummy_dhs_pr